STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000013712Troponin T2d, cardiac. (233 aa)    
Predicted Functional Partners:
SMAX5B_018348
Myosin light chain 1 skeletal muscle.
   
 0.933
SMAX5B_014608
Putative ladinin-1.
 
 0.916
ENSSMAP00000006294
annotation not available
   
 0.913
TNNC1
Cardiac troponin C.
   
 0.913
SMAX5B_013644
Troponin I slow skeletal muscle.
 
 0.912
SMAX5B_010105
Putative troponin I slow skeletal muscle-like.
 
 0.861
SMAX5B_009860
Putative troponin I slow skeletal muscle-like.
 
 0.860
SMAX5B_009728
Putative troponin I slow skeletal muscle-like.
 
 0.857
ENSSMAP00000009887
Troponin I type 2a (skeletal, fast), tandem duplicate 1.
 
 0.855
SMAX5B_011632
Troponin C.
   
 0.853
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.