STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LDLRAD3Putative low-density lipoprotein receptor class A domain-containing protein 3. (359 aa)    
Predicted Functional Partners:
SMAX5B_022102
Met proto-oncogene (Hepatocyte growth factor receptor)-like.
    
  0.790
SMAX5B_014380
Putative macrophage-stimulating protein receptor-like.
    
  0.790
SMAX5B_002292
Putative macrophage-stimulating protein receptor-like.
    
  0.790
SMAX5B_012637
Putative intersectin-2.
    
 0.726
SMAX5B_008282
Putative intersectin-2.
    
 0.726
SMAX5B_004904
Putative alpha-2-macroglobulin receptor-associated protein.
    
 0.713
RELN
Putative reelin.
    
 0.712
SMAX5B_017678
Putative proprotein convertase subtilisin/kexin type 9; Belongs to the peptidase S8 family.
    
 0.688
SMAX5B_005320
Putative phosphatidylinositide phosphatase SAC1.
    
 0.673
SMAX5B_021317
Putative phosphatidylinositide phosphatase SAC1-B.
    
 0.673
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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