SMAX5B_009814 protein (Scophthalmus maximus)

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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protein homology

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[Homology]

Score

SMAX5B_009814

Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2. (332 aa)

Predicted Functional Partners:

SMAX5B_014793

0.841

AMPD3

0.776

SMAX5B_002364

0.741

SMAX5B_012525

0.661

SMAX5B_002751

0.656

SMAX5B_017256

0.612

ENSSMAP00000004380

0.607

ENSSMAP00000014195

0.607

SMAX5B_009870

0.538

SMAX5B_010247

0.516

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AMPD3	SMAX5B_002751	ENSSMAP00000030546	ENSSMAP00000013380	Putative AMP deaminase 3-like.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.744
AMPD3	SMAX5B_009814	ENSSMAP00000030546	ENSSMAP00000014340	Putative AMP deaminase 3-like.	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	0.776
AMPD3	SMAX5B_012525	ENSSMAP00000030546	ENSSMAP00000035057	Putative AMP deaminase 3-like.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.633
ENSSMAP00000004380	ENSSMAP00000014195	ENSSMAP00000004380	ENSSMAP00000014195	Solute carrier family 35 member B2.	Solute carrier family 35 member C1.	0.547
ENSSMAP00000004380	SMAX5B_009814	ENSSMAP00000004380	ENSSMAP00000014340	Solute carrier family 35 member B2.	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	0.607
ENSSMAP00000014195	ENSSMAP00000004380	ENSSMAP00000014195	ENSSMAP00000004380	Solute carrier family 35 member C1.	Solute carrier family 35 member B2.	0.547
ENSSMAP00000014195	SMAX5B_009814	ENSSMAP00000014195	ENSSMAP00000014340	Solute carrier family 35 member C1.	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	0.607
SMAX5B_002364	SMAX5B_002751	ENSSMAP00000000765	ENSSMAP00000013380	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.742
SMAX5B_002364	SMAX5B_009814	ENSSMAP00000000765	ENSSMAP00000014340	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	0.741
SMAX5B_002751	AMPD3	ENSSMAP00000013380	ENSSMAP00000030546	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	Putative AMP deaminase 3-like.	0.744
SMAX5B_002751	SMAX5B_002364	ENSSMAP00000013380	ENSSMAP00000000765	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.742
SMAX5B_002751	SMAX5B_009814	ENSSMAP00000013380	ENSSMAP00000014340	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	0.656
SMAX5B_002751	SMAX5B_012525	ENSSMAP00000013380	ENSSMAP00000035057	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.845
SMAX5B_002751	SMAX5B_014793	ENSSMAP00000013380	ENSSMAP00000031081	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.740
SMAX5B_009814	AMPD3	ENSSMAP00000014340	ENSSMAP00000030546	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	Putative AMP deaminase 3-like.	0.776
SMAX5B_009814	ENSSMAP00000004380	ENSSMAP00000014340	ENSSMAP00000004380	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	Solute carrier family 35 member B2.	0.607
SMAX5B_009814	ENSSMAP00000014195	ENSSMAP00000014340	ENSSMAP00000014195	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	Solute carrier family 35 member C1.	0.607
SMAX5B_009814	SMAX5B_002364	ENSSMAP00000014340	ENSSMAP00000000765	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.741
SMAX5B_009814	SMAX5B_002751	ENSSMAP00000014340	ENSSMAP00000013380	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.	0.656
SMAX5B_009814	SMAX5B_009870	ENSSMAP00000014340	ENSSMAP00000022349	Putative UDP-xylose and UDP-N-acetylglucosamine transporter isoform 2.	Putative chitinase domain-containing protein 1; Belongs to the glycosyl hydrolase 18 family.	0.538

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Network Stats

number of nodes:

11

number of edges:

27

average node degree:

4.91

avg. local clustering coefficient:

0.786

expected number of edges:

34

PPI enrichment p-value:

0.914

your network does not have significantly more
interactions than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006351

Transcription, DNA-templated

5 of 20

1.87

2.45

3.51e-06

GO:0010467

Gene expression

9 of 208

1.11

1.3

1.46e-06

GO:0009059

Macromolecule biosynthetic process

9 of 232

1.06

1.21

1.88e-06

GO:0031564

Transcription antitermination

2 of 4

2.17

0.98

0.0148

GO:0006353

DNA-templated transcription, termination

2 of 4

2.17

0.98

0.0148

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0003899

DNA-directed 5-3 RNA polymerase activity

3 of 5

2.25

1.7

0.00058

GO:0003735

Structural constituent of ribosome

4 of 55

1.33

1.0

0.0035

GO:0003723

RNA binding

5 of 96

1.19

0.98

0.0015

GO:0003676

Nucleic acid binding

9 of 370

0.86

0.78

0.00012

GO:0019843

rRNA binding

3 of 40

1.34

0.7

0.0297

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0000428

DNA-directed RNA polymerase complex

3 of 6

2.17

1.8

0.00033

GO:0005840

Ribosome

4 of 59

1.3

1.06

0.0018

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:74

Ribonucleoprotein, and Translation regulator activity

11 of 92

1.55

3.38

1.42e-14

CL:77

Ribosome, and Translation regulator activity

9 of 75

1.55

3.02

1.33e-11

CL:99

Ribosome

5 of 37

1.6

2.03

6.66e-06

CL:84

Ribosome

6 of 62

1.46

1.93

1.80e-06

CL:101

rRNA-binding

3 of 23

1.58

1.16

0.0030

(more ...)

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

con03020

RNA polymerase

3 of 4

2.34

2.07

0.00012

con03010

Ribosome

4 of 53

1.35

1.11

0.0015

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0008023

Transcription elongation factor complex

2 of 2

2.47

0.99

0.0157

GOCC:0000428

DNA-directed RNA polymerase complex

4 of 63

1.27

0.77

0.0157

GOCC:0022627

Cytosolic small ribosomal subunit

2 of 11

1.73

0.76

0.0320

GOCC:0005840

Ribosome

3 of 47

1.27

0.71

0.0238

GOCC:0032991

Protein-containing complex

8 of 534

0.65

0.43

0.0157

(more ...)

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0240

DNA-directed RNA polymerase

3 of 7

2.1

1.84

0.00025

KW-0689

Ribosomal protein

5 of 59

1.4

1.37

0.00023

KW-0889

Transcription antitermination

2 of 3

2.29

1.3

0.0037

KW-0806

Transcription termination

2 of 3

2.29

1.3

0.0037

KW-0548

Nucleotidyltransferase

3 of 33

1.43

1.0

0.0052

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00322

K homology RNA-binding domain

2 of 3

2.29

1.06

0.0110

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