STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000014394Myosin VIa. (1413 aa)    
Predicted Functional Partners:
ENSSMAP00000019849
DAB adaptor protein 2.
    
 0.952
SMAX5B_019105
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
    
  0.880
ENSSMAP00000030662
Clathrin, light chain A.
    
  0.880
ENSSMAP00000008002
Ribosomal protein S27a.
    
   0.840
ENSSMAP00000034351
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
   0.822
ENSSMAP00000003188
GIPC PDZ domain containing family, member 1.
    
 
 0.791
SMAX5B_006616
Putative PDZ domain-containing protein GIPC2.
    
 
 0.791
SMAX5B_022565
Putative PDZ domain-containing protein GIPC3.
    
 
 0.791
PAK3
Non-specific serine/threonine protein kinase.
    
  0.778
SMAX5B_010179
Non-specific serine/threonine protein kinase.
    
  0.778
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.