STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008128Tumor protein D52-like 1. (250 aa)    
Predicted Functional Partners:
SMAX5B_015831
Putative tumor protein D52-like.
  
 
 
0.892
ENSSMAP00000009855
annotation not available
    
  0.686
SMAX5B_014680
Putative tumor protein D54-like.
  
 
 
0.678
ENSSMAP00000034045
SNAP associated protein.
   
 
  0.656
SMAX5B_018940
Vesicle-associated membrane protein 7 isoform 3; Belongs to the synaptobrevin family.
     
 0.649
SMAX5B_011832
INPP5B.
    
  0.630
SMAX5B_009285
Putative inositol polyphosphate 5-phosphatase OCRL-1.
    
  0.630
SMAX5B_000978
Putative tumor protein D54-like.
    
 
0.629
SMAX5B_008250
Putative E3 ubiquitin-protein ligase RNF217.
 
    
 0.626
SMAX5B_013519
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.624
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.