STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000014508ORMDL sphingolipid biosynthesis regulator 3. (153 aa)    
Predicted Functional Partners:
ENSSMAP00000011936
Serine palmitoyltransferase, long chain base subunit 1.
    
 
 0.906
SMAX5B_020506
Putative serine palmitoyltransferase small subunit A-like.
    
 
 0.774
SMAX5B_008260
Putative isthmin-2.
    
 
 0.697
SMAX5B_008233
Putative serine palmitoyltransferase 2.
    
 
 0.697
SMAX5B_016899
Putative isthmin-1.
    
 
 0.697
SMAX5B_016881
Putative serine palmitoyltransferase 3 isoform 3.
    
 
 0.697
SMAX5B_003413
Putative serine palmitoyltransferase 2-like.
    
 
 0.697
SMAX5B_006420
Putative 2-amino-3-ketobutyrate coenzyme A ligase mitochondrial.
    
 
 0.639
SMAX5B_005205
5-aminolevulinate synthase.
    
 
 0.639
SMAX5B_014634
5-aminolevulinate synthase.
    
 
 0.639
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.