STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_004521Putative zona pellucida-like domain-containing protein 1-like. (403 aa)    
Predicted Functional Partners:
ENSSMAP00000008972
Dynein light chain roadblock-type 2.
   
    0.565
SMAX5B_013043
Dynein light chain roadblock.
   
    0.565
SMAX5B_021030
Putative MKL/myocardin-like protein 2.
  
     0.494
ENSSMAP00000019618
annotation not available
  
     0.477
SMAX5B_020158
Putative BRICHOS domain-containing protein 5.
      
 0.461
SMAX5B_018631
Anterior gradient protein 3-like isoform 4.
      
 0.453
SMAX5B_020227
Beta-type globin; Belongs to the globin family.
  
     0.415
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.