STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_001471Putative neuralized-like protein 4-like. (1639 aa)    
Predicted Functional Partners:
SMAX5B_012378
Putative mitogen-activated protein kinase 6 isoform 2.
    
 
 0.803
SMAX5B_022086
Putative centrosomal protein of 290 kDa.
    
 
 0.666
SMAX5B_000459
Putative kinectin.
    
 0.641
SMAX5B_001800
Transcription elongation factor B polypeptide 1 isoform 2; Belongs to the SKP1 family.
     
 0.621
SMAX5B_000769
Putative centrosomal protein of 120 kDa.
    
 
 0.617
SMAX5B_000552
Putative coiled-coil domain-containing protein 22.
     
 0.613
SMAX5B_002710
Putative E3 ubiquitin-protein ligase MIB2.
   
 0.583
ENSSMAP00000009288
annotation not available
    
  0.579
ENSSMAP00000023908
NEDD8 ubiquitin like modifier, like.
    
  0.579
SMAX5B_018677
Putative centrosomal protein of 97 kDa.
    
 
 0.572
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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