STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011485Microsmal triglyceride transfer protein. (919 aa)    
Predicted Functional Partners:
SMAX5B_015493
Putative apolipoprotein B-100-like.
   
 0.935
SMAX5B_019626
Putative apolipoprotein B-100-like isoform 2.
   
 0.935
SMAX5B_019676
Putative apolipoprotein B-100-like.
   
 0.935
ENSSMAP00000029640
annotation not available
   
 0.935
SMAX5B_022228
Vitellogenin C.
   
 0.922
SMAX5B_011385
Protein disulfide-isomerase.
   
 0.912
SMAX5B_001841
Protein disulfide-isomerase.
   
 0.912
SMAX5B_011456
Thioredoxin domain-containing protein.
   
 0.849
SMAX5B_005084
Protein disulfide-isomerase.
   
 0.849
SMAX5B_003116
Protein disulfide-isomerase.
   
 0.849
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.