STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_009857Putative USP6 N-terminal-like protein. (830 aa)    
Predicted Functional Partners:
RAB19
Putative ras-related protein Rab-19-like.
    
 0.691
SMAX5B_007825
Putative ras-related protein Rab-19-like.
    
 0.691
SMAX5B_004261
Putative rab5 GDP/GTP exchange factor.
   
  0.678
SMAX5B_013500
Putative rab5 GDP/GTP exchange factor-like.
   
  0.678
SMAX5B_016549
Putative rab5 GDP/GTP exchange factor-like.
   
  0.678
SMAX5B_006401
Putative ADP-ribosylation factor-binding protein GGA1.
    
  0.561
SMAX5B_001611
Putative ADP-ribosylation factor-binding protein GGA1-like.
    
  0.561
SMAX5B_011359
Putative ADP-ribosylation factor-binding protein GGA3-like.
    
  0.561
SMAX5B_008591
RAB5C member RAS oncogene family.
    
 0.559
SMAX5B_015805
Ras-related protein rab-5a isoform 2.
    
 0.559
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.