SMAX5B_003048 protein (Scophthalmus maximus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SMAX5B_003048

Putative alpha-2B adrenergic receptor-like. (506 aa)

Predicted Functional Partners:

SMAX5B_007298

0.700

ENSSMAP00000018468

0.699

SMAX5B_005210

0.699

ENSSMAP00000020302

0.699

GNAS

0.699

GNG4

0.697

SMAX5B_009137

0.697

GNAZ

0.697

SMAX5B_015801

0.685

SMAX5B_006060

0.682

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSMAP00000018468	GNAZ	ENSSMAP00000018468	ENSSMAP00000033141	annotation not available	Guanine nucleotide-binding protein G(Z) subunit alpha.	0.674
ENSSMAP00000018468	GNG4	ENSSMAP00000018468	ENSSMAP00000017175	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.875
ENSSMAP00000018468	SMAX5B_003048	ENSSMAP00000018468	ENSSMAP00000015029	annotation not available	Putative alpha-2B adrenergic receptor-like.	0.699
ENSSMAP00000018468	SMAX5B_006060	ENSSMAP00000018468	ENSSMAP00000029014	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.851
ENSSMAP00000018468	SMAX5B_007298	ENSSMAP00000018468	ENSSMAP00000025053	annotation not available	Uncharacterized protein.	0.900
ENSSMAP00000018468	SMAX5B_009137	ENSSMAP00000018468	ENSSMAP00000020624	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.875
ENSSMAP00000020302	GNAZ	ENSSMAP00000020302	ENSSMAP00000033141	annotation not available	Guanine nucleotide-binding protein G(Z) subunit alpha.	0.680
ENSSMAP00000020302	GNG4	ENSSMAP00000020302	ENSSMAP00000017175	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.875
ENSSMAP00000020302	SMAX5B_003048	ENSSMAP00000020302	ENSSMAP00000015029	annotation not available	Putative alpha-2B adrenergic receptor-like.	0.699
ENSSMAP00000020302	SMAX5B_006060	ENSSMAP00000020302	ENSSMAP00000029014	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.851
ENSSMAP00000020302	SMAX5B_007298	ENSSMAP00000020302	ENSSMAP00000025053	annotation not available	Uncharacterized protein.	0.900
ENSSMAP00000020302	SMAX5B_009137	ENSSMAP00000020302	ENSSMAP00000020624	annotation not available	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.875
GNAS	GNAZ	ENSSMAP00000024473	ENSSMAP00000033141	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein G(Z) subunit alpha.	0.670
GNAS	GNG4	ENSSMAP00000024473	ENSSMAP00000017175	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.875
GNAS	SMAX5B_003048	ENSSMAP00000024473	ENSSMAP00000015029	Guanine nucleotide-binding protein G(S) subunit alpha.	Putative alpha-2B adrenergic receptor-like.	0.699
GNAS	SMAX5B_006060	ENSSMAP00000024473	ENSSMAP00000029014	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.851
GNAS	SMAX5B_007298	ENSSMAP00000024473	ENSSMAP00000025053	Guanine nucleotide-binding protein G(S) subunit alpha.	Uncharacterized protein.	0.900
GNAS	SMAX5B_009137	ENSSMAP00000024473	ENSSMAP00000020624	Guanine nucleotide-binding protein G(S) subunit alpha.	Guanine nucleotide-binding protein subunit gamma; Guanine nucleotide-binding proteins (G proteins) are involved as a modulator or transducer in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.	0.875
GNAZ	ENSSMAP00000018468	ENSSMAP00000033141	ENSSMAP00000018468	Guanine nucleotide-binding protein G(Z) subunit alpha.	annotation not available	0.674
GNAZ	ENSSMAP00000020302	ENSSMAP00000033141	ENSSMAP00000020302	Guanine nucleotide-binding protein G(Z) subunit alpha.	annotation not available	0.680