STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005638Putative fin bud initiation factor-like. (216 aa)    
Predicted Functional Partners:
SMAX5B_009747
Putative unique cartilage matrix-associated protein-like.
      
 0.529
ENSSMAP00000015784
Usher syndrome 1C.
      
 0.524
SMAX5B_009960
Tetraspanin.
      
 0.457
SMAX5B_010015
Putative secretion-regulating guanine nucleotide exchange factor.
      
 0.457
SMAX5B_003239
Tetraspanin.
      
 0.457
ENSSMAP00000017247
annotation not available
      
 0.454
SMAX5B_003228
Putative zinc finger protein 536.
      
 0.454
ZFC3H1
Putative zinc finger C3H1 domain-containing protein.
      
 0.454
SMAX5B_009503
Putative TBC1 domain family member 15.
      
 0.452
SMAX5B_009949
Anoctamin.
      
 0.449
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.