STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018416Putative ATP-binding cassette sub-family A member 12. (445 aa)    
Predicted Functional Partners:
SMAX5B_019523
Putative GDP-fucose protein O-fucosyltransferase 1.
     
 0.933
SMAX5B_012316
Spon1a F-spondin1.
     
 0.711
SMAX5B_015403
Putative spondin-1-like.
     
 0.711
SMAX5B_010947
Putative disintegrin and metalloproteinase with thrombospondin motifs 13.
     
 0.702
ENSSMAP00000018361
annotation not available
     
 0.689
SMAX5B_016637
Putative ADAMTS-like protein 1.
     
 0.689
SMAX5B_021232
Putative ADAMTS-like protein 3-like.
     
 0.689
SMAX5B_008883
Putative spondin-2-like.
     
 0.660
ENSSMAP00000009750
ADAMTS like 5.
     
 0.660
SMAX5B_009321
Putative spondin-2.
     
 0.660
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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