STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014302Nicalin. (550 aa)    
Predicted Functional Partners:
SMAX5B_011146
Putative coiled-coil domain-containing protein 47.
    
 
 0.904
SMAX5B_012137
Transmembrane protein 147.
    
 
 0.901
SMAX5B_007888
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.878
SMAX5B_010113
60S ribosomal protein L4-B.
    
   0.818
SMAX5B_002361
Plug_translocon domain-containing protein.
   
 
 0.781
SMAX5B_014037
Plug_translocon domain-containing protein.
   
 
 0.781
SMAX5B_001796
Transmembrane channel-like protein.
    
 
 0.778
SMAX5B_012084
Uncharacterized protein.
    
   0.753
SMAX5B_015504
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.744
RPL27A
Putative 60S ribosomal protein L27a-like; Belongs to the universal ribosomal protein uL15 family.
    
 
 0.744
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.