STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016834Putative 39S ribosomal protein L14 mitochondrial isoform 2. (148 aa)    
Predicted Functional Partners:
SMAX5B_002561
Putative 28S ribosomal protein S12 mitochondrial isoform 2; Belongs to the universal ribosomal protein uS12 family.
   
 
 0.980
SMAX5B_016253
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
 
 0.980
SMAX5B_008789
Coiled-coil-helix-coiled-coil-helix domain-containing protein 1.
   
   0.977
SMAX5B_002294
Putative 39S ribosomal protein L20 mitochondrial; Belongs to the bacterial ribosomal protein bL20 family.
   
 
 0.974
SMAX5B_000706
Putative tumor protein p53-inducible protein 13.
   
   0.965
SMAX5B_022515
Putative 39S ribosomal protein L54 mitochondrial-like.
   
   0.965
SMAX5B_010401
Putative 39S ribosomal protein L40 mitochondrial isoform 2.
   
   0.959
ENSSMAP00000024134
Mitochondrial ribosomal protein S16.
   
 
 0.958
SMAX5B_020371
Putative peptidyl-tRNA hydrolase ICT1 mitochondrial.
   
 
 0.953
SMAX5B_012408
Putative 39S ribosomal protein L16 mitochondrial.
   
 0.952
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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