STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005645Putative potassium voltage-gated channel subfamily A member 4; Belongs to the potassium channel family. (538 aa)    
Predicted Functional Partners:
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.955
ENSSMAP00000011552
Ribosomal protein L31.
   
 0.870
ENSSMAP00000016109
Ribosomal protein L23a.
  
 0.864
SMAX5B_015573
60S ribosomal protein L30.
   
 0.863
SMAX5B_021258
Putative 60S ribosomal protein L35.
  
 0.860
SMAX5B_016627
Ribosomal protein L34-like isoform 2.
  
 0.860
SMAX5B_005164
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.860
SMAX5B_018640
60S ribosomal protein L24.
  
 0.858
SMAX5B_014920
Ribosomal protein L32 isoform 10.
  
 0.856
SMAX5B_001676
60S ribosomal protein L21 isoform 10.
  
 0.855
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.