STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014038Retinol dehydrogenase 11 (All-trans/9-cis/11-cis). (321 aa)    
Predicted Functional Partners:
SMAX5B_013709
Putative cytochrome b5 reductase 4.
  
 0.801
ENSSMAP00000018162
Si:ch211-131k2.3.
  
 0.792
SMAX5B_016729
Putative malonyl-CoA-acyl carrier protein transacylase mitochondrial.
  
 0.779
SMAX5B_011097
3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
  
 0.779
SMAX5B_003944
Putative adrenodoxin mitochondrial.
  
 0.740
SMAX5B_007520
Putative adrenodoxin-like protein mitochondrial.
  
 0.740
SMAX5B_006832
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
  
 0.704
SMAX5B_004941
Putative NADH dehydrogenase.
   
 0.696
SMAX5B_002462
Putative NADH dehydrogenase.
   
 0.696
SMAX5B_004819
Putative receptor-interacting serine/threonine-protein kinase 4.
  
 0.692
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.