STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002724Putative nephrocystin-4. (1456 aa)    
Predicted Functional Partners:
SMAX5B_008617
Putative nephrocystin-1.
   
 0.982
SMAX5B_009472
Uncharacterized protein.
    
 0.981
SMAX5B_012919
C2 domain-containing protein.
    
 0.935
SMAX5B_002107
Putative formin-like protein 2.
    
 0.824
SMAX5B_014703
Putative formin-like protein 3.
    
 0.824
SMAX5B_008737
Putative formin-like protein 1.
    
 0.824
SMAX5B_006537
Uncharacterized protein.
    
 0.824
SMAX5B_020549
Putative formin-like protein 1.
    
 0.824
SMAX5B_018644
Putative formin-like protein 2-like.
    
 0.824
ENSSMAP00000005597
annotation not available
    
 0.769
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.