STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011212Putative P43 5S RNA-binding protein-like. (385 aa)    
Predicted Functional Partners:
SMAX5B_019619
Putative adenylate kinase 9 isoform 2.
    
  0.873
GTF3C1
Putative general transcription factor 3C polypeptide 1-like.
    
 0.829
SMAX5B_013983
Putative transcription factor TFIIIB component B''-like.
    
 0.809
SMAX5B_003895
Putative general transcription factor 3C polypeptide 3.
    
 0.765
SMAX5B_011990
RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.756
SMAX5B_012370
Putative TATA-box-binding protein-like.
   
 0.746
SMAX5B_015187
Putative general transcription factor 3C polypeptide 5.
    
 0.731
SMAX5B_009051
Putative transcription factor IIIB 90 kDa subunit-like.
   
 
 0.720
SMAX5B_012645
MGC112305.
    
 0.714
SMAX5B_015099
Putative general transcription factor 3C polypeptide 4.
    
 0.702
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.