STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020622Tubulin polyglutamylase ttll6. (221 aa)    
Predicted Functional Partners:
SMAX5B_020541
Putative sorting nexin-11.
      
 0.489
SMAX5B_020553
Putative CDK5 regulatory subunit-associated protein 3.
      
 0.463
ENSSMAP00000000735
Centrosomal protein 41.
      
 0.456
SMAX5B_022081
Putative centrosomal protein of 41 kDa.
      
 0.456
SMAX5B_000350
Putative tubulin polyglutamylase TTLL5.
      
0.455
ENSSMAP00000004362
annotation not available
      
 0.451
SMAX5B_008356
Putative cytosolic carboxypeptidase-like protein 5.
      
 0.451
SMAX5B_016057
Putative tetratricopeptide repeat protein 30A-like.
      
 0.448
SMAX5B_017650
Putative OCIA domain-containing protein 2.
      
 0.426
SMAX5B_021485
Putative ubiquitin-conjugating enzyme E2 Z.
      
 0.410
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.