STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019166Putative LON peptidase N-terminal domain and RING finger protein 1-like. (592 aa)    
Predicted Functional Partners:
ENSSMAP00000008002
Ribosomal protein S27a.
   
  0.841
ENSSMAP00000008891
Tumor protein p53 binding protein, 1.
    
 0.795
ENSSMAP00000000415
annotation not available
    
 0.743
ENSSMAP00000014581
annotation not available
    
 0.743
SMAX5B_018326
Putative BRCA1-associated RING domain protein 1 isoform 2.
    
 0.741
SMAX5B_006457
Ubiquitin-conjugating enzyme E2 variant 2.
     
 0.719
SMAX5B_007767
Putative ubiquitin-conjugating enzyme E2 N-like; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.715
SMAX5B_009815
Ubiquitin-conjugating enzyme E2 N; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.715
ENSSMAP00000014631
annotation not available
    
 0.710
ENSSMAP00000034351
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.710
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.