STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000015891RNA binding protein, mRNA processing factor 2a. (300 aa)    
Predicted Functional Partners:
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.789
SMAX5B_019490
RNA-binding protein with multiple splicing isoform 2.
  
  
0.733
SMAX5B_011302
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.717
SMAX5B_005730
Eukaryotic initiation factor 4A-II; Belongs to the DEAD box helicase family.
   
 0.716
SMAX5B_010234
Splicing factor 3B subunit 1.
   
 0.715
ENSSMAP00000029652
annotation not available
   
 0.715
SMAX5B_010561
Putative splicing factor 3B subunit 2.
   
 0.710
ENSSMAP00000011070
Splicing factor 3b, subunit 4.
    
 0.705
SMAX5B_003961
Splicing factor 3B subunit 3.
    
 0.705
SMAX5B_017597
Putative histone H2A deubiquitinase MYSM1.
   
 0.702
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.