STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018241Putative DNA excision repair protein ERCC-1. (401 aa)    
Predicted Functional Partners:
SMAX5B_020449
Putative DNA repair endonuclease XPF.
   
 0.999
SMAX5B_000328
Putative Fanconi anemia group M protein.
   
 0.999
SMAX5B_007591
Putative DNA repair protein complementing XP-A cells.
    
 0.989
SMAX5B_008723
Putative E3 ubiquitin-protein ligase FANCL.
    
 0.984
ENSSMAP00000003049
SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae).
   
 0.982
FANCG
FA complementation group G.
    
 0.982
SMAX5B_018290
Putative Fanconi anemia group B protein.
    
 0.982
SMAX5B_007075
Putative crossover junction endonuclease MUS81.
   
 0.976
SMAX5B_003026
Asparaginyl-tRNA synthetase cytoplasmic isoform 2.
   
 0.960
SMAX5B_020186
Putative Fanconi anemia-associated protein of 100 kDa.
    
 0.933
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.