STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011165Integrin beta; Belongs to the integrin beta chain family. (790 aa)    
Predicted Functional Partners:
SMAX5B_018425
Putative fibronectin-like.
    
 0.963
SMAX5B_011995
Putative integrin alpha-8; Belongs to the integrin alpha chain family.
   
 0.951
SMAX5B_020277
Putative integrin alpha-3; Belongs to the integrin alpha chain family.
   
 0.946
SMAX5B_012204
Putative integrin alpha-10; Belongs to the integrin alpha chain family.
   
 0.928
ENSSMAP00000018101
Talin 1.
   
 0.921
SMAX5B_013855
Putative laminin subunit gamma-3-like.
   
 0.903
SMAX5B_010130
Putative talin-2.
   
 0.903
SMAX5B_013143
Putative talin-2-like.
   
 0.902
SMAX5B_009391
Putative fermitin family-like 3 isoform 2.
   
 0.901
SMAX5B_013447
Putative vitronectin.
    
 0.896
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.