STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_012794Putative transmembrane protein 17B-like isoform 2. (184 aa)    
Predicted Functional Partners:
SMAX5B_020966
Putative B9 domain-containing protein 1 isoform 2.
    
 
 0.672
ENSSMAP00000000869
Transmembrane protein 231.
    
 
 0.655
SMAX5B_008617
Putative nephrocystin-1.
      
 0.607
SMAX5B_011985
Putative meckelin.
      
 0.606
SMAX5B_019221
Putative transmembrane protein 216-like.
   
  
 0.557
SMAX5B_002603
Putative inactive polyglycylase TTLL10.
      
 0.537
SMAX5B_002724
Putative nephrocystin-4.
      
 0.534
SMAX5B_014597
Putative coiled-coil domain-containing protein lobo-like.
      
 0.528
SMAX5B_009472
Uncharacterized protein.
      
 0.528
ENSSMAP00000013676
MKS transition zone complex subunit 1.
      
 0.520
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.