STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CERT1Putative collagen type IV alpha-3-binding protein-like. (680 aa)    
Predicted Functional Partners:
SMAX5B_005663
Putative sorting nexin-1.
    
 0.775
SMAX5B_016285
Casein kinase 1 gamma 2a; Belongs to the protein kinase superfamily.
    
 0.775
SMAX5B_022499
Casein kinase 1 gamma 2a; Belongs to the protein kinase superfamily.
    
 0.775
SMAX5B_005216
Putative vesicle-associated membrane protein-associated protein B-like.
    
 0.591
SMAX5B_006453
Putative vesicle-associated membrane protein-associated protein A.
    
 0.591
VAPB
Putative vesicle-associated membrane protein-associated protein B/C-like.
    
 0.579
SMAX5B_008005
Putative zinc finger protein 479-like.
    
 0.517
SMAX5B_019108
Putative motile sperm domain-containing protein 1.
    
 0.517
SMAX5B_011219
Putative stAR-related lipid transfer protein 3.
      
 0.461
SMAX5B_010951
Steroidogenic acute regulatory protein, mitochondrial; Plays a key role in steroid hormone synthesis by enhancing the metabolism of cholesterol into pregnenolone. Mediates the transfer of cholesterol from the outer mitochondrial membrane to the inner mitochondrial membrane where it is cleaved to pregnenolone.
      
 0.459
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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