STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_005069UNC80 domain-containing protein. (277 aa)    
Predicted Functional Partners:
SMAX5B_018605
Sodium leak channel non-selective protein.
   
 0.993
SMAX5B_000427
Uncharacterized protein.
   
 0.992
SMAX5B_019619
Putative adenylate kinase 9 isoform 2.
    
  0.878
SMAX5B_022704
Putative transmembrane protein FAM155A-like.
    
 
 0.841
FAM155A
Putative transmembrane protein FAM155A-like.
    
 
 0.841
SMAX5B_018361
Putative E3 SUMO-protein ligase RanBP2.
   
 0.718
SMAX5B_002807
Retinoblastoma-binding protein 5.
    
 0.712
SMAX5B_016962
Ash2-like.
    
 0.712
SMAX5B_019267
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.703
SMAX5B_021281
Putative nuclear pore complex protein Nup133.
    
 0.701
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.