STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020777Putative L-aspartate dehydrogenase. (336 aa)    
Predicted Functional Partners:
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
ENSSMAP00000016109
Ribosomal protein L23a.
  
 0.993
SMAX5B_006124
Putative 60S ribosomal protein L23-like isoform 2; Belongs to the universal ribosomal protein uL14 family.
  
 0.993
SMAX5B_001676
60S ribosomal protein L21 isoform 10.
  
 0.990
SMAX5B_012694
60S ribosomal protein L13; Belongs to the eukaryotic ribosomal protein eL13 family.
   
 0.989
SMAX5B_021258
Putative 60S ribosomal protein L35.
  
 0.988
SMAX5B_015504
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
  
 0.988
ENSSMAP00000008673
Ribosomal protein L35a.
  
 0.987
SMAX5B_015640
Putative 60S acidic ribosomal protein P1-like; Belongs to the eukaryotic ribosomal protein P1/P2 family.
   
 0.987
ENSSMAP00000010889
Mitochondrial ribosomal protein L17.
  
 0.987
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.