STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016842Putative vitrin. (580 aa)    
Predicted Functional Partners:
SMAX5B_008251
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.889
SMAX5B_009257
Putative FRAS1-related extracellular matrix protein 1-like.
    
 0.733
SMAX5B_013751
Putative FRAS1-related extracellular matrix protein 1.
    
 0.733
SMAX5B_019350
Putative nucleoporin GLE1.
    
 0.714
SMAX5B_019335
Putative extracellular matrix protein FRAS1.
    
 0.699
SMAX5B_014547
40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.
   
  0.679
SMAX5B_017996
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 
 0.653
SMAX5B_006135
40S ribosomal protein S28 isoform 2.
   
   0.649
SMAX5B_005763
Putative 40S ribosomal protein S15-like isoform 3; Belongs to the universal ribosomal protein uS19 family.
   
   0.648
SMAX5B_017989
Putative tumor necrosis factor receptor superfamily member 6.
    
 0.647
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.