STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_013792Putative GTPase-activating Rap/Ran-GAP domain-like protein 3 isoform 2. (1052 aa)    
Predicted Functional Partners:
SMAX5B_000093
Putative afadin.
    
 0.597
ENSSMAP00000000086
annotation not available
    
 0.581
SMAX5B_018659
RALB protein.
    
 0.581
SMAX5B_009581
Ras-related protein Ral-A.
    
 0.535
ENSSMAP00000011416
Ral GTPase activating protein, beta subunit (non-catalytic).
   
 0.524
SMAX5B_010934
Putative UPF0586 protein C9orf41-like isoform 2.
      
 0.513
SMAX5B_018289
Putative trafficking protein particle complex subunit 10.
      
 0.513
SMAX5B_000664
Putative transforming growth factor beta regulator 1.
   
  
 0.503
CSDE1
Putative cold shock domain-containing protein E1 isoform 3.
    
 0.502
SMAX5B_009841
GTPase KRas.
    
 0.502
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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