STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_011062Centromere protein H isoform 2. (239 aa)    
Predicted Functional Partners:
SMAX5B_001886
Putative centromere protein K.
   
  0.783
SMAX5B_007407
Putative centromere protein M-like isoform 2.
   
  0.774
ENSSMAP00000002939
Centromere protein N.
   
 0.747
SMAX5B_009291
Putative centromere protein I.
   
 0.738
SMAX5B_002811
Putative centromere protein P-like isoform 2.
   
  0.722
SMAX5B_008166
Putative centromere protein W.
   
 
  0.665
SMAX5B_012680
Putative centromere protein Q.
   
 
  0.632
SMAX5B_011252
Putative kinetochore protein Nuf2 isoform 3.
   
 
 0.546
CENPS
Putative centromere protein S-like.
     
 0.520
SMAX5B_014838
Somatostatin IB.
     
 0.520
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.