STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010681Putative gem-associated protein 5. (1497 aa)    
Predicted Functional Partners:
SMAX5B_012522
Putative RNA polymerase-associated protein LEO1-like.
   
 0.997
SMAX5B_014888
Putative ATP-dependent RNA helicase DDX20.
   
 0.990
SMAX5B_008446
Putative gem-associated protein 4.
   
 0.956
SMAX5B_022033
Putative gem-associated protein 8.
    
 0.953
SMAX5B_010994
Putative survival motor neuron protein 1-like.
   
 0.950
SMAX5B_013326
Gemin 7.
    
 0.931
SMAX5B_010949
Putative tetratricopeptide repeat protein 37.
    
 0.914
SMAX5B_015912
Putative helicase SKI2W.
    
 0.908
SMAX5B_021606
Putative gem-associated protein 6.
    
 0.906
SMAX5B_006101
Parafibromin.
    
 0.887
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.