STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_002752Putative DNA repair protein complementing XP-C cells. (981 aa)    
Predicted Functional Partners:
SMAX5B_009773
Putative general transcription factor IIH subunit 1.
    
 0.990
SMAX5B_012508
Putative TFIIH basal transcription factor complex helicase XPB subunit.
   
 0.983
ENSSMAP00000002558
RAD23 homolog A, nucleotide excision repair protein a.
   
 0.970
ENSSMAP00000008247
annotation not available
   
 0.970
RAD23B
Putative UV excision repair protein RAD23-like B.
   
 0.970
SMAX5B_019905
ERCC2/XPD protein.
    
 0.967
SMAX5B_019201
EF-hand 6 multi-domain protein.
    
 0.964
SMAX5B_019173
Putative caltractin.
    
 0.964
SMAX5B_016951
Putative centrin-3.
    
 0.963
ENSSMAP00000008235
annotation not available
   
 0.960
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.