STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_014235Synaptoporin. (339 aa)    
Predicted Functional Partners:
SMAX5B_011896
Putative vesicle-associated membrane protein 2-like.
   
 0.633
SMAX5B_003182
Putative vesicle-associated membrane protein 1-like.
   
 0.633
SMAX5B_004219
Synaptobrevin.
   
 0.633
SMAX5B_007367
Putative sialic acid synthase-like.
     
 0.614
SMAX5B_007359
Putative bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase isoform 4.
     
 0.594
SMAX5B_016979
Beta-hexosaminidase.
   
 
  0.592
VAMP3
Putative vesicle-associated membrane protein 2-like.
   
 0.582
SMAX5B_008238
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.565
SMAX5B_013074
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.565
SMAX5B_010718
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.544
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.