STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAC1Putative ras-related C3 botulinum toxin substrate 1. (216 aa)    
Predicted Functional Partners:
SMAX5B_012637
Putative intersectin-2.
    
 0.962
SMAX5B_008282
Putative intersectin-2.
    
 0.962
SMAX5B_008644
Putative intersectin-1-like.
    
 0.942
ENSSMAP00000002370
annotation not available
    
 0.942
SMAX5B_007940
Cytoplasmic FMR1-interacting protein 1.
   
 0.896
SMAX5B_020752
Putative brain-specific angiogenesis inhibitor 1-associated protein 2.
   
 0.874
SMAX5B_020616
Putative brain-specific angiogenesis inhibitor 1-associated protein 2-like.
   
 0.874
SMAX5B_012958
Putative partitioning defective 6-like alpha.
    
 0.874
SMAX5B_008327
Non-specific serine/threonine protein kinase.
   
 0.871
SMAX5B_000347
Non-specific serine/threonine protein kinase.
   
 0.871
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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