STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018399Putative thioredoxin domain-containing protein 3-like; Belongs to the NDK family. (649 aa)    
Predicted Functional Partners:
SMAX5B_002561
Putative 28S ribosomal protein S12 mitochondrial isoform 2; Belongs to the universal ribosomal protein uS12 family.
  
 0.982
SMAX5B_002795
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
  
 0.979
SMAX5B_004084
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.
   
 0.979
SMAX5B_019627
Putative 28S ribosomal protein S10 mitochondrial isoform 2.
  
 0.976
SMAX5B_002543
28S ribosomal protein S15 mitochondrial; Belongs to the universal ribosomal protein uS15 family.
  
 0.975
RPS20
40S ribosomal protein S20 isoform 2.
  
 0.974
SMAX5B_018852
40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
  
 0.971
SMAX5B_013115
Putative 28S ribosomal protein S11 mitochondrial-like; Belongs to the universal ribosomal protein uS11 family.
  
 0.966
SMAX5B_006337
Thioredoxin mitochondrial.
  
 0.965
ENSSMAP00000001280
Leucine-rich repeats and guanylate kinase domain containing.
  
 0.962
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.