STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000017314Caveolae associated protein 4b. (309 aa)    
Predicted Functional Partners:
SMAX5B_002602
Mitotic spindle assembly checkpoint protein mad2b.
    
   0.600
SMAX5B_022102
Met proto-oncogene (Hepatocyte growth factor receptor)-like.
    
  0.533
SMAX5B_000420
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.533
SMAX5B_014380
Putative macrophage-stimulating protein receptor-like.
    
  0.533
SMAX5B_002292
Putative macrophage-stimulating protein receptor-like.
    
  0.533
SMAX5B_002827
Transforming growth factor beta; Belongs to the TGF-beta family.
   
 0.532
INHBB
Putative inhibin beta B chain-like.
   
 0.526
SMAX5B_021701
Putative inhibin beta B chain-like.
   
 0.526
SMAX5B_009512
Putative inhibin beta A chain-like.
   
 0.521
ENSSMAP00000017750
Inhibin subunit beta Aa.
   
 0.521
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.