STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_018275Putative ankyrin repeat and zinc finger domain-containing protein 1. (731 aa)    
Predicted Functional Partners:
SMAX5B_007542
Putative transitional endoplasmic reticulum ATPase-like; Belongs to the AAA ATPase family.
   
 
 0.888
SMAX5B_010967
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 
 0.888
SPATA5
Putative spermatogenesis-associated protein 5.
   
 
 0.868
SMAX5B_012720
Putative spermatogenesis-associated protein 5-like protein 1 isoform 3.
   
 
 0.868
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
    
   0.858
NEMF
Putative nuclear export mediator factor NEMF.
   
 
 0.751
SMAX5B_014336
60S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10.
    
 
 0.735
ENSSMAP00000003082
Ribosomal protein L10.
    
   0.723
SMAX5B_017388
Putative 60S ribosomal protein L38; Belongs to the eukaryotic ribosomal protein eL38 family.
    
   0.723
SMAX5B_015573
60S ribosomal protein L30.
    
   0.723
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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