STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003044Putative UNC119-binding protein C5orf30-like. (213 aa)    
Predicted Functional Partners:
SPDEF
Putative SAM pointed domain-containing Ets transcription factor-like.
    
   0.718
SMAX5B_013435
GMP_PDE_delta domain-containing protein.
    
 
 0.670
UNC119
GMP_PDE_delta domain-containing protein.
    
 
 0.670
SPDEF-2
SAM pointed domain containing ETS transcription factor.
    
   0.656
SMAX5B_014048
GMP_PDE_delta domain-containing protein.
    
 
 0.617
SMAX5B_018776
GMP_PDE_delta domain-containing protein.
    
 
 0.617
SMAX5B_021778
Putative leucine-rich repeat-containing protein 57.
    
   0.424
SMAX5B_012478
Transcription factor PU.1.
    
 
 0.419
SMAX5B_016736
Putative transcription factor Spi-C.
    
   0.416
SMAX5B_014903
Putative transcription factor Spi-B-like.
    
   0.416
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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