STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_008169Putative transcription factor 21-like. (184 aa)    
Predicted Functional Partners:
SMAX5B_012595
Putative transcription factor 12.
    
 0.784
SMAX5B_006647
Putative transcription factor E2-alpha-like.
    
 0.784
SMAX5B_022501
Putative transcription factor E2-alpha-like isoform 3.
    
 0.784
SMAX5B_003040
Putative transcription factor 4-like.
    
 0.784
TCF4
Putative transcription factor 4-like.
    
 0.784
SMAX5B_009804
Putative transcription factor 12-like.
    
 0.762
SMAX5B_019518
Putative transcription factor GATA-5.
   
 0.639
SMAX5B_006501
Putative transcription factor GATA-6.
   
 0.623
SMAX5B_019616
Putative transcription factor GATA-4.
   
 0.612
SMAX5B_018067
LIM domain-binding protein 1.
    
 0.589
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.