STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSMAP00000017979annotation not available (58 aa)    
Predicted Functional Partners:
SMAX5B_001457
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.914
ENSSMAP00000029580
annotation not available
    
 0.913
SMAX5B_000208
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
 
 0.893
DXO
Putative decapping and exoribonuclease protein isoform 3.
    
 
 0.890
SMAX5B_005922
Putative RNA polymerase II subunit B1 CTD phosphatase RPAP2.
   
 0.888
SMAX5B_001282
DNA-directed RNA polymerase II subunit RPB3 isoform 2.
    
 0.856
ENSSMAP00000005408
Polymerase (RNA) II (DNA directed) polypeptide I.
    
 0.853
SMAX5B_006679
DNA-directed RNA polymerase II polypeptide F isoform 2.
    
 0.848
ENSSMAP00000001934
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.847
SMAX5B_017158
DNA-directed RNA polymerase II subunit RPB4.
    
  0.845
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.