SMAX5B_012749 protein (Scophthalmus maximus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

SMAX5B_012749

DUF2152 domain containing protein. (620 aa)

Predicted Functional Partners:

SMAX5B_005338

0.655

SMAX5B_014931

0.644

SMAX5B_014953

0.644

ENSSMAP00000011072

0.602

SMAX5B_005791

0.600

SMAX5B_000547

0.536

SMAX5B_018441

0.533

ENSSMAP00000025669

0.523

SMAX5B_010891

0.514

ENSSMAP00000024442

0.489

Your Current Organism:

Scophthalmus maximus

NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSMAP00000011072	SMAX5B_005338	ENSSMAP00000011072	ENSSMAP00000010255	ATPase H+ transporting accessory protein 1 like b.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.957
ENSSMAP00000011072	SMAX5B_005791	ENSSMAP00000011072	ENSSMAP00000013134	ATPase H+ transporting accessory protein 1 like b.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.957
ENSSMAP00000011072	SMAX5B_012749	ENSSMAP00000011072	ENSSMAP00000018130	ATPase H+ transporting accessory protein 1 like b.	DUF2152 domain containing protein.	0.602
ENSSMAP00000011072	SMAX5B_018441	ENSSMAP00000011072	ENSSMAP00000003235	ATPase H+ transporting accessory protein 1 like b.	Putative renin receptor isoform 3.	0.936
ENSSMAP00000024442	SMAX5B_012749	ENSSMAP00000024442	ENSSMAP00000018130	Migration and invasion inhibitory protein.	DUF2152 domain containing protein.	0.489
ENSSMAP00000025669	SMAX5B_012749	ENSSMAP00000025669	ENSSMAP00000018130	annotation not available	DUF2152 domain containing protein.	0.523
SMAX5B_000547	SMAX5B_012749	ENSSMAP00000005897	ENSSMAP00000018130	Putative vacuolar protein sorting-associated protein 13D.	DUF2152 domain containing protein.	0.536
SMAX5B_005338	ENSSMAP00000011072	ENSSMAP00000010255	ENSSMAP00000011072	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	ATPase H+ transporting accessory protein 1 like b.	0.957
SMAX5B_005338	SMAX5B_005791	ENSSMAP00000010255	ENSSMAP00000013134	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.896
SMAX5B_005338	SMAX5B_012749	ENSSMAP00000010255	ENSSMAP00000018130	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	DUF2152 domain containing protein.	0.655
SMAX5B_005338	SMAX5B_014931	ENSSMAP00000010255	ENSSMAP00000027086	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Putative V-type proton ATPase subunit S1.	0.994
SMAX5B_005338	SMAX5B_014953	ENSSMAP00000010255	ENSSMAP00000030942	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Putative V-type proton ATPase subunit S1-like.	0.994
SMAX5B_005338	SMAX5B_018441	ENSSMAP00000010255	ENSSMAP00000003235	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Putative renin receptor isoform 3.	0.998
SMAX5B_005791	ENSSMAP00000011072	ENSSMAP00000013134	ENSSMAP00000011072	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	ATPase H+ transporting accessory protein 1 like b.	0.957
SMAX5B_005791	SMAX5B_005338	ENSSMAP00000013134	ENSSMAP00000010255	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	0.896
SMAX5B_005791	SMAX5B_012749	ENSSMAP00000013134	ENSSMAP00000018130	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	DUF2152 domain containing protein.	0.600
SMAX5B_005791	SMAX5B_014931	ENSSMAP00000013134	ENSSMAP00000027086	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Putative V-type proton ATPase subunit S1.	0.980
SMAX5B_005791	SMAX5B_014953	ENSSMAP00000013134	ENSSMAP00000030942	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Putative V-type proton ATPase subunit S1-like.	0.980
SMAX5B_005791	SMAX5B_018441	ENSSMAP00000013134	ENSSMAP00000003235	V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.	Putative renin receptor isoform 3.	0.974
SMAX5B_010891	SMAX5B_012749	ENSSMAP00000012946	ENSSMAP00000018130	Putative metallo-beta-lactamase domain-containing protein 2.	DUF2152 domain containing protein.	0.514