STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_016952Putative ankyrin repeat family A protein 2-like isoform 2. (314 aa)    
Predicted Functional Partners:
SMAX5B_006771
Putative regulatory factor X-associated protein.
    
 0.958
SMAX5B_003141
Putative DNA-binding protein RFX5.
    
 0.765
SMAX5B_009975
Putative DNA-binding protein RFX7-like.
   
 0.730
RFX7
Putative DNA-binding protein RFX7-like.
   
 0.729
SMAX5B_003560
Putative transcription factor RFX3.
    
 0.720
SMAX5B_007561
Putative MHC class II regulatory factor RFX1.
    
 0.720
SMAX5B_000061
Putative DNA-binding protein RFX6.
    
 0.720
SMAX5B_010008
Putative transcription factor RFX4.
    
 0.720
SMAX5B_020930
Putative MHC class II regulatory factor RFX1-like.
    
 0.720
SMAX5B_022415
Putative DNA-binding protein RFX2.
    
 0.720
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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