STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_020512Putative oxidoreductase-like domain-containing protein 1. (133 aa)    
Predicted Functional Partners:
SMAX5B_013602
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
    
 
 0.656
SMAX5B_006447
Putative UPF0562 protein C7orf55-like.
   
   0.443
SMAX5B_000900
Putative cysteine--tRNA ligase mitochondrial.
    
   0.428
SMAX5B_000562
Putative tRNA (Adenine(58)-N(1))-methyltransferase mitochondrial.
    
   0.428
SMAX5B_007126-2
Putative lanosterol synthase-like isoform 6.
   
   0.425
ENSSMAP00000017330
Adenine nucleotide translocase lysine methyltransferase.
   
 
 0.403
SMAX5B_009072
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
    
   0.402
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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