STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CABP7Putative calcium-binding protein 7-like. (215 aa)    
Predicted Functional Partners:
SMAX5B_002418
Peripheral plasma membrane protein CASK; Belongs to the MAGUK family.
    
 0.813
CASK
Peripheral plasma membrane protein CASK.
    
 0.813
SMAX5B_001718
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.762
SMAX5B_018218
Putative myosin-IIIb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.762
SMAX5B_003996
Serine/threonine-protein phosphatase.
    
 0.698
SMAX5B_018947
Serine/threonine-protein phosphatase.
    
 0.698
SMAX5B_005710
Serine/threonine-protein phosphatase.
    
 0.698
SMAX5B_004383
Serine/threonine-protein phosphatase.
    
 0.698
SMAX5B_004819
Putative receptor-interacting serine/threonine-protein kinase 4.
    
  0.683
SMAX5B_020261
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.663
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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