STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003268Putative transcription factor HES-5-like. (231 aa)    
Predicted Functional Partners:
SMAX5B_022503
Putative transcription factor HES-1.
     
0.826
ENSSMAP00000029716
Hairy-related 9.
     
0.826
SMAX5B_000618
Putative transcription cofactor HES-6-like.
     
0.701
SMAX5B_006511
Putative transcription factor HES-1-B-like.
     
0.701
ENSSMAP00000003500
FA complementation group C.
    
  0.696
FANCG
FA complementation group G.
    
  0.696
SMAX5B_010116
Putative Fanconi anemia group F protein.
    
  0.696
SMAX5B_008723
Putative E3 ubiquitin-protein ligase FANCL.
    
  0.696
ENSSMAP00000031577
Ribosomal protein L10a.
    
  0.661
SMAX5B_014754
Putative Fanconi anemia group E protein isoform 4.
    
  0.661
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.