STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_019784Putative coiled-coil domain-containing protein 40. (974 aa)    
Predicted Functional Partners:
SMAX5B_020697
Putative leucine-rich repeat-containing protein 48.
   
 
 0.836
TTC29
Putative sodium/bile acid cotransporter 7 isoform 2.
   
 
 0.815
SMAX5B_005925
Putative 5'-AMP-activated protein kinase subunit beta-2-like.
    
 0.803
SMAX5B_015062
AMPKBI domain-containing protein.
    
 0.803
SMAX5B_018793
Putative 5'-AMP-activated protein kinase subunit beta-1-like.
    
 0.803
SMAX5B_006302
Putative coiled-coil domain-containing protein 39.
    
 
 0.733
SMAX5B_014217
5-AMP-activated protein kinase subunit gamma-1.
   
 0.728
ENSSMAP00000011169
Protein kinase, AMP-activated, gamma 3a non-catalytic subunit.
   
 0.728
ENSSMAP00000015458
Protein kinase, AMP-activated, gamma 3b non-catalytic subunit.
   
 0.728
ENSSMAP00000018071
annotation not available
   
 0.728
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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