STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_010810Putative MORC family CW-type zinc finger protein 2A-like. (1049 aa)    
Predicted Functional Partners:
SMAX5B_002528
Putative 28S ribosomal protein S23 mitochondrial.
      
 0.537
NAT10
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires the tRNA- binding adapter protein THUMPD1 for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
 
 0.527
ENSSMAP00000015739
Si:ch73-264p11.1.
      
 0.495
ENSSMAP00000015666
Cell proliferation regulating inhibitor of protein phosphatase 2A.
      
 0.459
SMAX5B_015415
Zinc finger CCCH domain-containing protein 18.
   
    0.450
SMAX5B_014993
Putative ATP-dependent RNA helicase DHX35 (DEAH box protein 35).
   
 
 0.423
SMAX5B_004060
Putative ATP-dependent RNA helicase DHX33.
   
 
 0.419
SMAX5B_009717
Putative alpha-and gamma-adaptin-binding protein p34-like isoform 2.
      
 0.408
ENSSMAP00000005484
Suppressor of variegation 3-9 homolog 1b.
    
 
 0.406
SMAX5B_019950
Putative ATP-dependent RNA helicase DHX34.
   
 
 0.400
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.