STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_022745Putative rhophilin-2. (687 aa)    
Predicted Functional Partners:
SMAX5B_001804
Transmembrane 9 superfamily member; Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
   
 0.948
SMAX5B_008067
Charged multivesicular body protein 4b.
   
 0.837
SMAX5B_004680
Putative charged multivesicular body protein 4c-like.
   
 0.837
SMAX5B_003267
Putative charged multivesicular body protein 4c-like.
   
 0.837
SMAX5B_007445
Putative multivesicular body subunit 12A isoform 2.
     
 0.666
SMAX5B_011002
Putative charged multivesicular body protein 7 isoform 2.
    
 0.629
SMAX5B_002226
GTP-binding protein isoform 2.
    
 0.623
SMAX5B_000534
Putative transforming protein RhoA-like.
    
 0.623
SMAX5B_014498
Rho-related GTP-binding protein RhoC.
    
 0.623
SMAX5B_001110
Putative signal transducing adapter molecule 2.
   
 
 0.623
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.