STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMAX5B_003455Putative decaprenyl-diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family. (385 aa)    
Predicted Functional Partners:
SMAX5B_019716
Putative squalene synthase.
  
 0.958
COQ2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
  
 
 0.945
SMAX5B_012307
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes.
  
 0.937
SMAX5B_016809
Putative geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
     
 0.926
SMAX5B_001878
Putative decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
  
0.919
SMAX5B_001926
Putative isopentenyl-diphosphate Delta-isomerase 1.
  
 
 0.916
SMAX5B_002532
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.908
ENSSMAP00000026733
annotation not available
    
 0.899
SMAX5B_000195
Protein farnesyltransferase subunit beta; Catalyzes the transfer of a farnesyl moiety from farnesyl diphosphate to a cysteine at the fourth position from the C-terminus of several proteins. The beta subunit is responsible for peptide-binding.
   
 0.890
SMAX5B_016190
Putative tRNA dimethylallyltransferase mitochondrial; Belongs to the IPP transferase family.
  
 
 0.887
Your Current Organism:
Scophthalmus maximus
NCBI taxonomy Id: 52904
Other names: Pleuronectes maximus, Psetta maxima, Rhombus maximus, S. maximus, turbot
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.